Publications:

PhD Thesis

Journals

1. A, A. Quadeer, S. F. Ahmed, and M. R. McKay, “Landscape of epitopes targeted by T cells in 852
   individuals recovered from COVID-19: Meta-analysis, immunoprevalence, and web platform,”
   Cell Reports Medicine, vol. 2, no. 6, June 2021 
   DOI: 10.1016/j.xcrm.2021.100312
2. M. S. Sohail, S. F. Ahmed, A, A. Quadeer and M. R. McKay, “In silico T cell epitope identification for
   SARS-CoV-2: Progress and perspectives,” Advanced Drug Delivery Reviews, January 2021
   (Impact factor: 15.47)
   DOI: 10.1016/j.addr.2021.01.007
3. S. F. Ahmed, A, A. Quadeer, J. P. Barton and M. R. McKay, “Cross-serotypically conserved epitope
   targets for a universal T cell-based Dengue vaccine,” PLOS Neglected Tropical Diseases, vol. 14, no. 9,
   September 2020 (Impact factor: 4.41)
   DOI: 10.1371/journal.pntd.0008676
4. S. F. Ahmed, A, A. Quadeer and M. R. McKay, “COVIDep: a web-based platform for real-time
   reporting of vaccine target recommendations for SARS-CoV-2,” Nature Protocols, vol. 15, no. 7,
   July 2020 (Impact factor: 13.49)
   DOI: 10.1038/s41596-020-0358-9
5. S. F. Ahmed, A, A. Quadeer and M. R. McKay, “Preliminary Identification of Potential Vaccine
   Targets for the COVID-19 Coronavirus (SARS-CoV-2) Based on SARS-CoV Immunological Studies,”
   Viruses, vol. 12, no. 3, March 2020 (Impact factor: 5.04)
   DOI: doi.org/10.3390/v12030254
6. S.M. Sait, S.F. Ahmed and M. R. Rafiq, “Experimental study on broadband radiofrequency electro-
   magnetic radiations near cellular base stations: a novel perspective of public health,” Journal of
   Thermal Analysis and Calorimetry, 2020 (Impact factor: 4.62)
   DOI: 10.1007/s10973-020-09982-4
7. S. F. Ahmed, A, A. Quadeer, D. Morales-Jimenez and M. R. McKay, “Sub-dominant principal
   components inform new vaccine targets for HIV Gag,” Bioinformatics, vol. 35, no. 20, October
   2019 (Impact factor: 6.93)
   DOI: 10.1093/bioinformatics/btz524
8. T. Ballal, T. Y. Al-Naffouri and S. F. Ahmed, “Low-Complexity Bayesian Estimation of Cluster-
   Sparse Channels,” in IEEE Transactions on Communications, vol. 63, no. 11, November 2015
   (Impact Factor: 5.08)
   DOI: 10.1109/TCOMM.2015.2480092
9. A. Khoukhi and S. F. Ahmed, “A genetically modified fuzzy linear discriminant analysis for face
   recognition,” Journal of the Franklin Institute, Vol. 348, no. 10, December 2011
   (Impact Factor: 4.50)
   DOI: 10.1016/j.jfranklin.2011.04.010

Conferences

1. S. F. Ahmed, T. Y. Al-Naffouri and A. H. Muqaibel, “Low-Complexity MAP Based Channel Support
   Estimation for Impulse Radio Ultra-Wide band (IR-UWB) Communications,” 2011 IEEE Interna-
   tional Conference on Ultra-Wideband (ICUWB) September 14-16, 2011 Bologna, Italy
   DOI: 10.1109/ICUWB.2011.6058866
2. A. A. Quadeer, S. F. Ahmed and T. Y. Al-Naffouri, “Structure Based Bayesian Sparse Reconstruc-
   tion Using Non-Gaussian Prior,” Forty-Ninth Annual Allerton Conference on Communication,
   Control, and Computing September 28 – September 30, 2011 Allerton Retreat Center, Monti-
   cello, Illinois, USA
   DOI: 10.1109/Allerton.2011.6120179
3. A. Khoukhi, S. F. Ahmed, ”Fuzzy LDA for face recognition with GA based optimization,” Annual
   Meeting of the North American Fuzzy Information Processing Society (NAFIPS), pp.1-6, 12-14
   July 2010 at Toronto, Canada
   DOI: 10.1109/NAFIPS.2010.5548410
4. A. A. Khan, S. F. Ahmed, et al., ”Digital Attendance Recording System,” International Conference
   on Information and Emerging Technologies, 2007, pp.1-5, 6-7 July 2007 at Karachi, Pakistan
   DOI: 10.1109/ICIET.2007.4381320

Patents:

1. A. Khoukhi, and S. F. Ahmed, ”Method of performing facial recognition using genetically modified fuzzy linear discriminant analysis,” Patent Number US 8478005, published October 2012.
2. S. F. Ahmed and T. Y. Al-Naffouri, ”Low-Complexity Method for Estimating Impulse-Radio UWB Wireless Channels,” Patent Number US 9450786, published September 2016.,